Reference

bootit()

An internal function to generate bootstrapped confidence intervals around salmon escapement estimates

boot_escapement()

Calculate bootstrapped 95 percent confidence intervals around salmon escapement estimates

daily_passage()

Estimate daily passage and cumulative daily passage of salmon based on the top model from model_escapement()

escapement()

Estimate annual salmon escapement

explore_plots()

Create exploratory plot of raw salmon photo counts

hourly_passage()

Estimate hourly passage and cumulative hourly passage of salmon based on the top model from model_escapement()

import_format()

Import and format photo and video salmon count data

loadRData()

An internal function to load and rename an Rdata object

model_diagnostics()

Model diagnostics for salmon escapement models from photo and video count data

model_escapement()

Model salmon escapement using photo and video counts

plot_boot_escapement()

Plot bootstrapped annual estimates of salmon escapement

plot_daily()

Plot estimated minimum daily salmon escapement by year

plot_hourly()

Plot estimate hourly salmon escapement by day

plot_topmodel()

Plots of the top model for estimating salmon escapement from photo and video count data

run_report()

Generate an Rmarkdown report of salmon escapement

salmon_counts

Video and photo counts of sockeye salmon at Akalura River, Kodiak Island, Alaska